Options for BED output from the Table Browser

The BED output option gives you some choices. You can add a track line, making the file a custom track. The second section treats all output as genes. For BED files with six or fewer columns you can add flanks to the regions. For BED files with exon information (e.g. BED 12) you can chose exons, coding exons, etc. We just want the intervals as they are in the table. Leave Whole Gene selected (red arrow) and click on Send query to Galaxy (green arrow).