Lab meetings are usually held on Wednesdays from 3:30-4:30 pm in the
large commons area ("curved room") of 501 Wartik, unless otherwise noted.
| Date | Presentor(s) | Topic |
|---|---|---|
| Wed Jan 12 | Ross Hardison | Predicting cis-regulatory modules without genome-wide alignments |
| Wed Jan 19 3:00 pm |
Anton Nekrutenko et al. | Galaxy: a metaserver for genomic analysis |
| Thu Jan 20 1:00 pm 514 Wartik |
Rebecka Jörnsten | (Computational genomics journal club) Adaptive missing data imputation for DNA microarrays and its effect on significance analysis of differential expression |
| Thu Jan 20 4:00 pm 104 Thomas |
Rebecka Jörnsten | (Statistics colloquium) Clustering gene expression data based on p-values |
| Wed Jan 26 12:00 pm 315 Rider II |
Joe Felsenstein | (WUN bioinformatics video conference) Bioinformatics and phylogenies: molecular biology meets population biology |
| Wed Jan 26 | (no CCGB meeting) | |
| Wed Feb 2 12:10 pm 317 Mueller |
Ross Hardison | (IMEG seminar) Gene regulatory elements discovered by vertebrate genome comparisons |
| Wed Feb 2 | (no CCGB meeting) | |
| Thu Feb 3 4:00 pm 201 Thomas |
Adam Siepel | (Statistics colloquium) Comparative mammalian genomics: models of evolution and detection of functional elements (computation oriented) |
| Fri Feb 4 11:15 am 101 Althouse |
Adam Siepel | (BMB seminar) Comparative mammalian genomics: models of evolution and detection of functional elements (biology oriented) |
| Wed Feb 9 | Wojceich Makalowski | Junk - what is it good for? Story of a genomic clochard? |
| Wed Feb 16 | Webb Miller | Ancestral genomes |
| Wed Feb 23 12:10 pm 317 Mueller |
Alexander Bolshoy | (IMEG seminar) Overlapping messages as a strategy for vulnerability reduction |
| Wed Feb 23 | James Taylor | RP scores and beyond (presentation for CSH) |
| Thu Feb 24 4:00 pm 201 Thomas |
Danh Nguyen | (Statistics colloquium) A partial least squares (PLS) dimension reduction approach to some challenges in genome-wide expression analysis |
| Wed Mar 2 | Teresa Przytycka | |
| Wed Mar 9 | (spring break) | |
| Wed Mar 16 12:10 pm 317 Mueller |
Webb Miller | (IMEG seminar) Reconstructing the genome sequences of ancient mammals |
| Wed Mar 16 | Wen-Yu Chung (Makova) | Evolution and robustness of human gene co-expression network: the role of duplicate genes |
| Wed Mar 23 12:10 pm 317 Mueller |
Kateryna Makova | (IMEG seminar) Strong and weak male mutation bias at different sites in the primate genomes: insights from the human-chimpanzee comparison |
| Wed Mar 23 | Jim Kent | The UCSC Table Browser and a new tool, VisiGene |
| Thu Mar 24 4:00 pm Berg Auditorium 100 Life Sci Bldg |
Jim Kent | Tools for understanding the sequence, evolution, and function of the human genome |
| Tue Mar 29 4:00 pm 101 Althouse |
Jeff Bennetzen | Phylogenomic insights into genome dynamism, gene conservation and functional divergence in flowering plants |
| Wed Mar 30 | Laura Carrel | Genomics of gene expression on the human inactive X chromosome |
| Wed Apr 6 | Minmei Hou (Miller) | Orthologous alignment for multiple genomic sequences with rearrangements |
| Wed Apr 13 | Piotr Berman | Predicting secondary structures of protein and global optimization |
| Thu Apr 14 4:00 pm 201 Thomas |
Galin Jones | (Statistics colloquium) Ascent-based Monte Carlo EM |
| Wed Apr 20 | Stephan Schuster | |
| Wed Apr 27 | Bob Harris (Miller) | Variation in noncoding sequence conservation in vertebrates |
| Wed May 4 | (various) | Practice runs for CSH |
| Wed-Sun May 11-15 | CSHL Biology of Genomes meeting | |
| Wed May 18 | (various) | Post-conference discussion |
Past semesters:
Fall 2004
Summer 2004
Spring 2004
Fall 2003
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